Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928183.1_cds_XP_016475827.1_67722
CDS Infomation

[gene=LOC107797444] [db_xref=GeneID:107797444] [protein=allantoate deiminase-like] [protein_id=XP_016475827.1] [location=complement(join(33971..34093,34376..34537,34611..34736,34856..35098,35589..35675,35782..35887,35968..36077,37183..37299,37415..37499,37570..37673,37916..38001,38518..38665))] [gbkey=CDS]
Sequence

ATGGCGGCTCCTTCTCTTCACTCTTCTAATCTAACCTCATTTCCAACTTCCCATGCAATG
ACGAAGAACGTTCTTTCGATCTTATCCTTATTCTTTCTTGTTCTTTATCCTTCTTTCGCC
ATGGCTACTTCTGCTAACACATTCTTCGGTGAAAATACACAAGGCATAAAGTATGATCTG
TTTCCTGAAATCCTCAAGGAGGAAGCTGTTGCTAGACTTAATGAGCTCGGAAAGGTAAGT
GATGCAAATGACTACCTTGAAAGGACATTCCAGAGCCCTGCATCGATCAGAGCAGGAAAT
CTTCTTCGTGCATGGATGGAAGATGCGGGCTTGAAGACGTGGGTGGACCAAATGGGCAAT
GTCCATGGTCGGGCTGATGGGATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCCCAT
TTGGATACAGTTATCGATGCTGGATACTTTGATGGCTCATTGGGCATAATTTGTGCAATA
TCTGCATTGAAGGCATTGAATGCCACTGGAAGGTTGGATAAACTCAGGCGGCCGGTTGAG
GTAATTGCATTTAGTGATGAGGAGGGAGTGAGGTTTCAGTCGACCTTCTTGGGAAGTGCA
GCTATTGCTGGCTTATTACCAGTTTCAGCATTGCAAATACATGATAAGAATGGTGTGACA
GTGCAAGGTGCTCTGGGAGCAAGTTCTATAGAAACTACAGAAGAAAACCTTTTGCAGCTC
AAATATGAACCAGAATCTGTTTGGGGCTATGTTGAGGTTCACATTGAACAGGGACCCGTA
CTGGAGACTGTTGGTCTCCCTCTTGGTTTAGTAAAAGGCATAGCAGGGCAGACAAGATTG
AAGGTGACAGTGAGAGGCACACAAGGACATGCAGGAACAGTGCCCATGAATATGCGACAG
GATCCTATGGTTGCAGCTGCTGAACTAATTGTATTTCTGGAAAGCCTTTGTAAACAACCT
GACTATTATCTGTCCTATGATGGTCAATGCGCTTCTTCAACAGTGGAATCTCTTGCAGGA
TCTCTGGTCTGTACTGTTGGAGAGATATCAAGTTGGCCAAGTGCAAGTAATGTCATTCCA
GGCCAGGTGACATTCACTGTAGATGTACGTGCAATGGATGACACGGGACGAGAAGCTATA
ATTTATGAATTCTCCAATAGACTTTATCATATGTGTGATCGACGTTCTGTCTTTTGTAAC
GTTGAGCGAAAGCATGATGCAAATGCTGTCGTTTGCGATCCTGGCTTAAGTACAGAGCTG
AAATCTGCATCTCATGCTGCTTTGAAGAGAATTACCGGTGAGGATCCTGGTGATGTTCCA
GTACTGATGAGTGGAGCAGGTCATGATGCAATGGCCATGTCTCATCTAACCAAGGTGGGA
ATGCTATTTGTGCGTTGTCGTGGAGGCATCAGCCATTCTCCTGCGGAGCATGTATTAGAT
GATGATATTTGGGCAGCTGGAATGGCAGTACTTACATTTTTGGAGACCCTCTTGTAA

Peptide Sequence

PEP ID

XP_016475827.1
PEP Infomation

PREDICTED: allantoate deiminase-like [Nicotiana tabacum]
Sequence

MAAPSLHSSNLTSFPTSHAMTKNVLSILSLFFLVLYPSFAMATSANTFFGENTQGIKYDL
FPEILKEEAVARLNELGKVSDANDYLERTFQSPASIRAGNLLRAWMEDAGLKTWVDQMGN
VHGRADGINPSEKALLIGSHLDTVIDAGYFDGSLGIICAISALKALNATGRLDKLRRPVE
VIAFSDEEGVRFQSTFLGSAAIAGLLPVSALQIHDKNGVTVQGALGASSIETTEENLLQL
KYEPESVWGYVEVHIEQGPVLETVGLPLGLVKGIAGQTRLKVTVRGTQGHAGTVPMNMRQ
DPMVAAAELIVFLESLCKQPDYYLSYDGQCASSTVESLAGSLVCTVGEISSWPSASNVIP
GQVTFTVDVRAMDDTGREAIIYEFSNRLYHMCDRRSVFCNVERKHDANAVVCDPGLSTEL
KSASHAALKRITGEDPGDVPVLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLD
DDIWAAGMAVLTFLETLL

Transcript Sequence

Gene sequence data has not been registered.